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  1. OMG Issue

BSA — section 2.1.9 (p. 2-24) BioSequence

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  • Key: BSA-35
  • Legacy Issue Number: 3810
  • Status: closed  
  • Source: SciTegic Inc. ( Scott Markel)
  • Summary:

    section 2.1.9 (p. 2-24) BioSequence
    seq_intervals()'s lone exception IntervalOutOfBounds is insufficient to
    handle cases where the Interval is actually a SeqRegion that has an
    invalid StrandType or SeqRegionOperator.

    I suggest adding SeqRegionInvalid to cover this case. I don't think we
    need to add SeqRegionOutOfBounds; IntervalOutOfBounds seems sufficient
    for coordinate problems.
  • Reported: BSA 1.0b1 — Thu, 7 Sep 2000 04:00 GMT
  • Disposition: Resolved — BSA 1.0
  • Disposition Summary:

    accepted
  • Updated: Fri, 6 Mar 2015 20:57 GMT